Basic Information
Locus ID:
gene:TRIDC3BG048420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ElonginA binding-protein 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 532690997 | 532698734 | - | gene:TRIDC3BG048420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 140,846.73 Da | 47.09 | 71.53 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 34 | 73 | 2.1E-7 | IPR001841 |
| Pfam | PF00628 | PHD-finger | 149 | 187 | 1.8E-8 | IPR019787 |
| SUPERFAMILY | SSF57850 | RING/U-box | 23 | 81 | 2.75E-14 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 152 | 188 | 5.32E-11 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 143 | 187 | 7.0E-11 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 20 | 92 | 1.2E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 34 | 72 | 3.0E-6 | IPR001841 |
| SMART | SM00184 | ring_2 | 127 | 186 | 17.0 | IPR001841 |
| SMART | SM00249 | PHD_3 | 135 | 187 | 1.7E-7 | IPR001965 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 34 | 73 | 11.928664 | IPR001841 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 66 | 189 | 8.511 | IPR019787 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 50 | 59 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1110 | 1138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 987 | 1021 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1106 | 1215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 711 | 775 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1066 | 1087 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 380 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 716 | 749 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 380 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1034 | 1048 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1049 | 1065 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 994 | 1021 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1172 | 1192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1034 | 1087 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 894 | 919 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10930.1 | 0 | |
| RefSeq | XP_044350017.1 | uncharacterized protein At4g10930-like isoform X1 [Triticum aestivum] | 0 |
| Q8L7I1 | Uncharacterized protein At4g10930 OS=Arabidopsis thaliana OX=3702 GN=At4g10930 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6FTC3 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG048420.