Basic Information
Locus ID:
gene:TRIDC3BG044320
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E3 ubiquitin ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 485014934 | 485025978 | + | gene:TRIDC3BG044320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 134,319.78 Da | 47.04 | 78.84 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 226 | 354 | 1.10694E-19 | - |
| CDD | cd12108 | Hr-like | 577 | 736 | 9.91983E-28 | - |
| CDD | cd16464 | RING-H2_Pirh2 | 1047 | 1090 | 6.74608E-18 | - |
| CDD | cd12108 | Hr-like | 1 | 95 | 1.86667E-23 | - |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 575 | 737 | 7.6E-8 | IPR012312 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 2 | 97 | 8.1E-8 | IPR012312 |
| Pfam | PF05495 | CHY zinc finger | 919 | 994 | 4.1E-18 | IPR008913 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 223 | 355 | 2.5E-7 | IPR012312 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1045 | 1099 | 3.49E-7 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 985 | 1040 | 3.14E-15 | IPR037275 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 911 | 975 | 1.7E-18 | IPR037274 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1043 | 1091 | 2.1E-8 | IPR013083 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 225 | 372 | 1.2E-18 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 572 | 800 | 4.0E-25 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 1 | 115 | 6.5E-25 | - |
| SMART | SM00184 | ring_2 | 1048 | 1089 | 1.7E-5 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 984 | 1047 | 29.816021 | IPR017921 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1048 | 1089 | 11.235273 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 912 | 981 | 25.740093 | IPR008913 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 498 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 807 | 832 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_037413754.1 | zinc finger protein BRUTUS-like [Triticum dicoccoides] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7PUE9 | CHY-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG044320.