Basic Information
Locus ID:
gene:TRIDC3BG043990
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 481734135 | 481735233 | + | gene:TRIDC3BG043990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.76 | 29,099.61 Da | 74.84 | 58.40 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 220 | 257 | 4.26465E-9 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 219 | 263 | 7.9E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 219 | 264 | 1.04E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 194 | 268 | 3.4E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 220 | 257 | 7.4E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 220 | 258 | 10.881201 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 125 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 164 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 94 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | XP_037417848.1 | uncharacterized protein LOC119281435 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A077S2B0 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF265700020CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG043990.