Basic Information
Locus ID:
gene:TRIDC3BG043840
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 480338860 | 480341249 | + | gene:TRIDC3BG043840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 84,730.16 Da | 35.20 | 86.08 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 520 | 783 | 3.87343E-84 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 252 | 321 | 2.7E-5 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 519 | 777 | 1.1E-48 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 80 | 196 | 4.19E-13 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 498 | 782 | 2.16E-72 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 179 | 272 | 3.02E-7 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 42 | 151 | 3.7E-10 | IPR036426 |
| Gene3D | G3DSA:2.90.10.30 | - | 152 | 297 | 1.6E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 591 | 787 | 2.1E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 480 | 590 | 1.8E-28 | - |
| SMART | SM00108 | blect_4 | 40 | 152 | 1.7E-7 | IPR001480 |
| SMART | SM00220 | serkin_6 | 514 | 752 | 1.3E-32 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 3 | 795 | 5.4E-181 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 33 | 150 | 8.476547 | IPR001480 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 289 | 327 | 10.034655 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 514 | 787 | 39.000664 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 520 | 543 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 633 | 645 | - | IPR008271 |
| Coils | Coil | Coil | 542 | 562 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24080.2 | - | 0 |
| RefSeq | XP_037413708.1 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 [Triticum dicoccoides] | 0 |
| Q25AG2 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A077RTG3 | non-specific serine/threonine protein kinase OS=Triticum aestivum OX=4565 GN=TRAES_3BF012800040CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG043840.