Basic Information
Locus ID:
gene:TRIDC3BG041980
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 460378877 | 460386622 | - | gene:TRIDC3BG041980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 50,297.38 Da | 44.46 | 70.48 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 284 | 316 | 2.5E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 326 | 365 | 3.6E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 235 | 271 | 0.065 | IPR001680 |
| Pfam | PF12265 | Histone-binding protein RBBP4 or subunit C of CAF1 complex | 13 | 78 | 1.6E-16 | IPR022052 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 100 | 427 | 9.33E-44 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 443 | 6.9E-111 | IPR015943 |
| SMART | SM00320 | WD40_4 | 325 | 365 | 5.8E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 155 | 195 | 0.71 | IPR001680 |
| SMART | SM00320 | WD40_4 | 276 | 316 | 1.1E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 231 | 271 | 4.2E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 378 | 425 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 101 | 140 | 460.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 332 | 365 | 12.580379 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 283 | 316 | 11.711506 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 238 | 280 | 10.374778 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 332 | 365 | 10.469233 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 283 | 316 | 9.783781 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 234 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19520.1 | Transducin family protein / WD-40 repeat family protein. Controls flowering. | 0 |
| RefSeq | XP_037413557.1 | WD-40 repeat-containing protein MSI4-like [Triticum dicoccoides] | 0 |
| O22607 | WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana OX=3702 GN=MSI4 PE=1 SV=3 | 0 | |
| TrEMBL | W5CUZ3 | FVE OS=Triticum aestivum OX=4565 GN=FVE PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG041980.