Basic Information
Locus ID:
gene:TRIDC3BG040880
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 447644169 | 447654090 | - | gene:TRIDC3BG040880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 57,519.88 Da | 42.66 | 62.94 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16481 | RING-H2_TTC3 | 476 | 517 | 3.64049E-16 | - |
| Pfam | PF13639 | Ring finger domain | 475 | 517 | 6.4E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 467 | 520 | 3.85E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 457 | 523 | 1.4E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 476 | 516 | 4.7E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 476 | 517 | 12.577796 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53190.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037413459.1 | probable E3 ubiquitin-protein ligase ZFP1 isoform X1 [Triticum dicoccoides] | 0 |
| Q5QLR5 | Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza sativa subsp. japonica OX=39947 GN=ZFP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6FNR5 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG040880.