Basic Information
Locus ID:
gene:TRIDC3BG039750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 433912552 | 433929761 | - | gene:TRIDC3BG039750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 152,012.38 Da | 46.32 | 86.27 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 65 | 450 | 1.34E-27 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 45 | 314 | 3.3E-16 | IPR015943 |
| Gene3D | G3DSA:1.25.40.470 | - | 964 | 1208 | 1.2E-26 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 331 | 456 | 8.9E-7 | IPR015943 |
| SMART | SM00320 | WD40_4 | 313 | 355 | 0.22 | IPR001680 |
| SMART | SM00320 | WD40_4 | 261 | 304 | 0.083 | IPR001680 |
| SMART | SM00320 | WD40_4 | 61 | 100 | 0.5 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 320 | 364 | 8.937796 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1316 | 1343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1283 | 1425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1409 | 1425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1384 | 1400 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24710.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037413367.1 | uncharacterized protein LOC119276421 [Triticum dicoccoides] | 0 |
| Q54K14 | TSET complex member tstF OS=Dictyostelium discoideum OX=44689 GN=tstF PE=1 SV=1 | 0 | |
| TrEMBL | A0A453F551 | WD_REPEATS_REGION domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG039750.