Basic Information
Locus ID:
gene:TRIDC3BG039420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 431141893 | 431156825 | + | gene:TRIDC3BG039420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 66,109.95 Da | 44.10 | 90.82 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04003 | Dip2/Utp12 Family | 446 | 544 | 2.6E-14 | IPR007148 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 10 | 274 | 9.61E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 11 | 309 | 3.2E-28 | IPR015943 |
| SMART | SM00320 | WD40_4 | 134 | 171 | 0.92 | IPR001680 |
| SMART | SM00320 | WD40_4 | 2 | 36 | 58.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 92 | 131 | 0.013 | IPR001680 |
| SMART | SM00320 | WD40_4 | 174 | 214 | 64.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 599 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 378 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 567 | 590 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15420.1 | 0 | |
| RefSeq | XP_044357194.1 | uncharacterized protein LOC123078674 isoform X1 [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6FMY3 | Utp12 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG039420.