Basic Information
Locus ID:
gene:TRIDC3BG029760
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E2 binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 244747350 | 244756747 | - | gene:TRIDC3BG029760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 49,824.71 Da | 39.73 | 92.11 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01488 | Uba3_RUB | 50 | 345 | 0.0 | - |
| Pfam | PF08825 | E2 binding domain | 351 | 410 | 4.6E-20 | IPR014929 |
| Pfam | PF00899 | ThiF family | 46 | 341 | 4.1E-72 | IPR000594 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 51 | 410 | 1.83E-102 | IPR035985 |
| Gene3D | G3DSA:1.10.10.520 | Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 | 217 | 285 | 2.5E-32 | IPR023318 |
| Gene3D | G3DSA:3.10.290.20 | - | 349 | 425 | 1.9E-14 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 49 | 348 | 4.9E-68 | - |
| SMART | SM01181 | E2_bind_2 | 350 | 441 | 5.8E-32 | IPR014929 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 215 | 223 | - | IPR033127 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19180.1 | E1 C-terminal related 1. Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein. | 0 |
| RefSeq | XP_037412666.1 | NEDD8-activating enzyme E1 catalytic subunit-like [Triticum dicoccoides] | 0 |
| O65041 | NEDD8-activating enzyme E1 catalytic subunit OS=Arabidopsis thaliana OX=3702 GN=ECR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A077S011 | NEDD8-activating enzyme E1 catalytic subunit OS=Triticum aestivum OX=4565 GN=TRAES_3BF029600010CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG029760.