Basic Information
Locus ID:
gene:TRIDC3BG028560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 231351203 | 231356550 | + | gene:TRIDC3BG028560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.43 | 47,374.85 Da | 60.15 | 62.03 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 282 | 334 | 1.2E-4 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 275 | 336 | 2.79E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 263 | 337 | 1.2E-9 | IPR013083 |
| SMART | SM00184 | ring_2 | 282 | 334 | 1.1E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 282 | 335 | 11.028731 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 107 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75400.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037412563.1 | uncharacterized protein LOC119275760 isoform X1 [Triticum dicoccoides] | 0 |
| TrEMBL | W5CQG8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF038600020CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG028560.