Basic Information
Locus ID:
gene:TRIDC3BG028550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 231079168 | 231083109 | + | gene:TRIDC3BG028550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 46,768.91 Da | 58.60 | 52.22 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 276 | 334 | 2.34E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 263 | 335 | 1.7E-7 | IPR013083 |
| SMART | SM00184 | ring_2 | 281 | 333 | 3.1E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 281 | 334 | 10.659906 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 161 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75400.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037412560.1 | uncharacterized protein LOC119275759 [Triticum dicoccoides] | 0 |
| TrEMBL | Q6S5C6 | Putative C3H2C3 RING-finger protein OS=Triticum turgidum subsp. durum OX=4567 GN=6G2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG028550.