Basic Information
Locus ID:
gene:TRIDC3BG025780
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 201521125 | 201524567 | - | gene:TRIDC3BG025780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 100,706.54 Da | 35.50 | 104.21 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 28 | 89 | 1.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 463 | 521 | 2.7E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 627 | 853 | 4.6E-42 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 292 | 309 | 1.5 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 7 | 215 | 2.59E-43 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 155 | 510 | 5.96E-65 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 617 | 905 | 2.05E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 267 | 2.6E-70 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 712 | 923 | 3.5E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 268 | 556 | 4.4E-75 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 593 | 711 | 2.0E-24 | - |
| SMART | SM00369 | LRR_typ_2 | 221 | 245 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 149 | 173 | 71.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 625 | 925 | 6.0E-41 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 27 | 51 | 70.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 485 | 509 | 39.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 625 | 925 | 37.346989 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 756 | 768 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 631 | 654 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_037412350.1 | receptor-like protein kinase HSL1 [Triticum dicoccoides] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | W5CXY8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF115300010CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG025780.