Basic Information
Locus ID:
gene:TRIDC3BG024990
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PAN-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 185944449 | 185948461 | - | gene:TRIDC3BG024990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 83,348.58 Da | 36.69 | 92.09 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 467 | 728 | 1.57488E-95 | - |
| CDD | cd01098 | PAN_AP_plant | 319 | 386 | 5.89495E-17 | - |
| CDD | cd00028 | B_lectin | 38 | 158 | 3.29376E-17 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 84 | 181 | 9.3E-19 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 239 | 300 | 5.4E-6 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 464 | 723 | 1.7E-46 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 327 | 384 | 3.9E-10 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 103 | 179 | 2.49E-16 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 446 | 727 | 8.9E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 536 | 734 | 1.1E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 434 | 535 | 2.8E-29 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 26 | 155 | 1.2E-12 | IPR036426 |
| SMART | SM00108 | blect_4 | 37 | 158 | 2.0E-16 | IPR001480 |
| SMART | SM00473 | ntp_6 | 326 | 401 | 0.0046 | IPR003609 |
| SMART | SM00220 | serkin_6 | 461 | 726 | 5.0E-41 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 3 | 756 | 6.0E-215 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 322 | 402 | 8.418263 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 461 | 730 | 37.290451 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 31 | 154 | 12.837086 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 467 | 490 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 580 | 592 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037412240.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Triticum dicoccoides] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7PRB7 | Receptor-like serine/threonine-protein kinase OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG024990.