Basic Information
Locus ID:
gene:TRIDC3BG021960
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 155346604 | 155350518 | - | gene:TRIDC3BG021960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 37,202.57 Da | 39.32 | 79.24 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 253 | 289 | 2.3E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 3 | 341 | 1.53E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 146 | 1.1E-20 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 147 | 342 | 2.3E-14 | IPR015943 |
| SMART | SM00320 | WD40_4 | 59 | 97 | 1.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 247 | 289 | 6.5E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 301 | 340 | 12.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 14 | 53 | 48.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 100 | 141 | 0.034 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 254 | 289 | 10.811958 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 254 | 289 | 13.014815 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 239 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45760.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037412055.1 | WD repeat-containing protein 53-like [Triticum dicoccoides] | 0 |
| Q54BI5 | WD repeat-containing protein 53 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr53 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6FIZ1 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG021960.