Basic Information
Locus ID:
gene:TRIDC3BG021360
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 149792628 | 149795342 | - | gene:TRIDC3BG021360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.34 | 93,148.91 Da | 43.49 | 90.94 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 547 | 809 | 4.73105E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 547 | 810 | 2.6E-40 | IPR001245 |
| Pfam | PF12819 | Malectin-like domain | 86 | 411 | 2.4E-19 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 524 | 815 | 2.97E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 510 | 616 | 1.8E-34 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 225 | 413 | 3.3E-21 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 28 | 200 | 1.6E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 617 | 825 | 2.1E-51 | - |
| SMART | SM00220 | serkin_6 | 541 | 815 | 1.2E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 541 | 815 | 35.862919 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 547 | 569 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 662 | 674 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46290.1 | hercules receptor kinase 1. Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. | 0 |
| RefSeq | XP_037412021.1 | receptor-like protein kinase HERK 1 [Triticum dicoccoides] | 0 |
| Q9LX66 | Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana OX=3702 GN=HERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6FI70 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG021360.