Basic Information
Locus ID:
gene:TRIDC3BG019870
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBP14
Description:
ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 137248392 | 137258659 | - | gene:TRIDC3BG019870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 88,965.22 Da | 42.09 | 77.30 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14294 | UBA1_UBP5_like | 615 | 658 | 4.85792E-18 | - |
| CDD | cd02658 | Peptidase_C19B | 316 | 796 | 3.43676E-133 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 315 | 795 | 7.5E-43 | IPR001394 |
| Pfam | PF02148 | Zn-finger in ubiquitin-hydrolases and other protein | 187 | 260 | 4.6E-17 | IPR001607 |
| Pfam | PF00627 | UBA/TS-N domain | 674 | 709 | 9.4E-11 | IPR015940 |
| Pfam | PF17807 | Variant UBP zinc finger | 16 | 79 | 6.3E-23 | IPR041432 |
| Pfam | PF00627 | UBA/TS-N domain | 614 | 650 | 1.4E-5 | IPR015940 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 310 | 798 | 1.53E-77 | IPR038765 |
| SUPERFAMILY | SSF57850 | RING/U-box | 165 | 273 | 1.06E-33 | - |
| SUPERFAMILY | SSF46934 | UBA-like | 670 | 715 | 3.12E-10 | IPR009060 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 158 | 260 | 2.0E-38 | IPR013083 |
| Gene3D | G3DSA:1.10.8.10 | - | 648 | 719 | 1.0E-24 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 610 | 647 | 2.6E-7 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 308 | 800 | 3.0E-77 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 106 | 5.2E-33 | IPR013083 |
| SMART | SM00290 | Zf_UBP_1 | 186 | 241 | 5.1E-22 | IPR001607 |
| SMART | SM00165 | uba_6 | 675 | 712 | 5.5E-7 | IPR015940 |
| SMART | SM00165 | uba_6 | 614 | 652 | 5.1E-5 | IPR015940 |
| PIRSF | PIRSF016308 | UBP | 6 | 799 | 5.4E-274 | IPR016652 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 673 | 713 | 13.703554 | IPR015940 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 315 | 798 | 40.975899 | IPR028889 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 612 | 653 | 10.233572 | IPR015940 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 185 | 259 | 18.294212 | IPR001607 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 316 | 331 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 743 | 761 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 714 | 734 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20630.1 | ubiquitin-specific protease 14. Encodes a ubiquitin-specific protease. Identical to TTN6. Loss of function mutations are embryo lethals, having development arrested at the preglobular/globular stage. Also involved in root responses to phosphate deficiency. | 0 |
| RefSeq | XP_037411910.1 | ubiquitin carboxyl-terminal hydrolase 14-like [Triticum dicoccoides] | 0 |
| Q8L6Y1 | Ubiquitin carboxyl-terminal hydrolase 14 OS=Arabidopsis thaliana OX=3702 GN=UBP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A077RU45 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 GN=TRAES_3BF085400040CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG019870.