Basic Information
Locus ID:
gene:TRIDC3BG018650
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PHD-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 122964918 | 122966308 | + | gene:TRIDC3BG018650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 50,020.57 Da | 57.78 | 66.63 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15492 | PHD_BRPF_JADE_like | 404 | 452 | 4.77432E-21 | - |
| Pfam | PF00628 | PHD-finger | 405 | 453 | 1.0E-11 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 396 | 455 | 1.35E-17 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 388 | 457 | 8.3E-18 | IPR013083 |
| SMART | SM00249 | PHD_3 | 404 | 453 | 1.6E-11 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 402 | 455 | 10.1397 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 405 | 452 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 61 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14740.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_037411826.1 | phosphatase and actin regulator 4A-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A077RQH7 | PHD-type domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF096800020CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG018650.