Basic Information
Locus ID:
gene:TRIDC3BG018230
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 119803550 | 119810968 | - | gene:TRIDC3BG018230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 53,525.84 Da | 39.94 | 86.76 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 132 | 179 | 0.18 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 186 | 224 | 3.3E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 235 | 271 | 0.0011 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 132 | 442 | 1.27E-32 | IPR036322 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 79 | 1.26E-8 | IPR036047 |
| Gene3D | G3DSA:2.130.10.10 | - | 307 | 450 | 1.8E-12 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 118 | 306 | 5.5E-23 | IPR015943 |
| SMART | SM00320 | WD40_4 | 362 | 402 | 27.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 129 | 181 | 2.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 231 | 271 | 6.9E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 182 | 224 | 2.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 320 | 358 | 26.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 238 | 271 | 10.809215 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 238 | 271 | 9.071966 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 188 | 233 | 8.637032 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037411798.1 | ribosome assembly protein 4-like isoform X1 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A077RQH3 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF066700140CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG018230.