Basic Information
Locus ID:
gene:TRIDC3BG017420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NPR1/NIM1 like defence protein C terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 105475063 | 105522529 | + | gene:TRIDC3BG017420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 63,940.13 Da | 46.59 | 93.22 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18310 | BTB_POZ_NPR_plant | 37 | 189 | 3.81679E-55 | - |
| Pfam | PF12313 | NPR1/NIM1 like defence protein C terminal | 369 | 566 | 4.4E-84 | IPR021094 |
| Pfam | PF11900 | Domain of unknown function (DUF3420) | 226 | 270 | 5.3E-14 | IPR024228 |
| Pfam | PF00651 | BTB/POZ domain | 56 | 184 | 3.2E-8 | IPR000210 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 275 | 355 | 7.6E-8 | IPR020683 |
| SUPERFAMILY | SSF54695 | POZ domain | 47 | 187 | 2.28E-10 | IPR011333 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 263 | 370 | 1.35E-15 | IPR036770 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 25 | 223 | 1.5E-19 | IPR011333 |
| Gene3D | G3DSA:1.25.40.20 | - | 263 | 381 | 5.4E-17 | IPR036770 |
| SMART | SM00225 | BTB_4 | 57 | 189 | 3.6E-10 | IPR000210 |
| SMART | SM00248 | ANK_2a | 327 | 356 | 0.03 | IPR002110 |
| SMART | SM00248 | ANK_2a | 293 | 323 | 410.0 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 327 | 352 | 9.323959 | IPR002110 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 57 | 134 | 15.183633 | IPR000210 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 327 | 352 | 9.303788 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 556 | 580 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 557 | 580 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26120.1 | Ankyrin repeat family protein / BTB/POZ domain-containing protein. | 0 |
| RefSeq | XP_037411727.1 | BTB/POZ domain and ankyrin repeat-containing protein NPR1-like [Triticum dicoccoides] | 0 |
| Q9FDY4 | BTB/POZ domain and ankyrin repeat-containing protein NPR1 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6FHS8 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG017420.