Basic Information
Locus ID:
gene:TRIDC3BG016710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 98056647 | 98058936 | - | gene:TRIDC3BG016710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 75,090.64 Da | 34.71 | 92.10 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 46 | 281 | 5.39995E-98 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 369 | 637 | 1.03707E-96 | - |
| Pfam | PF00069 | Protein kinase domain | 364 | 633 | 5.2E-44 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 44 | 292 | 3.3E-73 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 344 | 655 | 2.87E-77 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 45 | 300 | 1.91E-74 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 41 | 281 | 7.1E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 440 | 1.1E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 653 | 1.3E-55 | - |
| SMART | SM00220 | serkin_6 | 363 | 635 | 4.3E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 363 | 642 | 35.156216 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 369 | 394 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 486 | 498 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037411689.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | W5CZG6 | (bread wheat) hypothetical protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF091900070CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG016710.