Basic Information
Locus ID:
gene:TRIDC3BG016680
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 97767559 | 97769571 | + | gene:TRIDC3BG016680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.77 | 53,560.75 Da | 43.61 | 82.91 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 68 | 269 | 1.6978E-86 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 354 | 467 | 1.4E-19 | IPR001245 |
| Pfam | PF00139 | Legume lectin domain | 66 | 280 | 1.2E-66 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 329 | 467 | 1.68E-34 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 66 | 287 | 3.17E-66 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 338 | 474 | 1.8E-34 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 55 | 278 | 2.4E-58 | - |
| SMART | SM00219 | tyrkin_6 | 351 | 474 | 4.4E-4 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 351 | 474 | 16.428667 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 357 | 380 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_044355585.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum aestivum] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453E4X8 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG016680.