Basic Information
Locus ID:
gene:TRIDC3BG013280
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 71838745 | 71848353 | + | gene:TRIDC3BG013280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 73,580.48 Da | 55.03 | 73.21 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 27 | 97 | 8.3E-17 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 19 | 101 | 5.99E-22 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 17 | 123 | 2.0E-25 | - |
| SMART | SM00213 | ubq_7 | 25 | 96 | 8.2E-19 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 25 | 100 | 20.478973 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 698 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 673 | 698 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 672 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25270.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_037411435.1 | ubiquitin-like domain-containing protein CIP73 isoform X2 [Triticum dicoccoides] | 0 |
| D5LXJ0 | Ubiquitin-like domain-containing protein CIP73 OS=Lotus japonicus OX=34305 GN=CIP73 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6GMU2 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG013280.