Basic Information
Locus ID:
gene:TRIDC3BG013250
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 71456077 | 71459637 | + | gene:TRIDC3BG013250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 64,621.44 Da | 47.68 | 86.71 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00037 | CLECT | 74 | 200 | 1.22113E-15 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 302 | 552 | 9.2E-38 | IPR001245 |
| Pfam | PF00059 | Lectin C-type domain | 82 | 199 | 8.4E-10 | IPR001304 |
| SUPERFAMILY | SSF56436 | C-type lectin-like | 49 | 201 | 8.92E-22 | IPR016187 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 259 | 553 | 7.72E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 357 | 568 | 4.7E-48 | - |
| Gene3D | G3DSA:3.10.100.10 | - | 49 | 204 | 9.3E-19 | IPR016186 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 239 | 356 | 1.5E-23 | - |
| SMART | SM00034 | CLECT_2 | 62 | 199 | 8.1E-14 | IPR001304 |
| SMART | SM00219 | tyrkin_6 | 280 | 552 | 1.6E-13 | IPR020635 |
| ProSiteProfiles | PS50041 | C-type lectin domain profile. | 71 | 199 | 13.0436 | IPR001304 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 281 | 553 | 30.661606 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 403 | 415 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 563 | 586 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 563 | 578 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| Coils | Coil | Coil | 586 | 586 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52310.1 | protein kinase family protein / C-type lectin domain-containing protein. | 0 |
| RefSeq | XP_044347222.1 | C-type lectin receptor-like tyrosine-protein kinase At1g52310 isoform X1 [Triticum aestivum] | 0 |
| Q9C823 | C-type lectin receptor-like tyrosine-protein kinase At1g52310 OS=Arabidopsis thaliana OX=3702 GN=At1g52310 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6FJT9 | C-type lectin receptor-like tyrosine-protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG013250.