Basic Information
Locus ID:
gene:TRIDC3BG012330
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 65335441 | 65337107 | - | gene:TRIDC3BG012330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 57,998.49 Da | 40.80 | 90.35 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 210 | 339 | 1.94563E-20 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 369 | 472 | 6.9E-17 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 1 | 110 | 4.1E-21 | IPR000210 |
| Pfam | PF00917 | MATH domain | 216 | 334 | 2.5E-7 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 207 | 342 | 1.06E-25 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 358 | 473 | 8.44E-21 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 1 | 109 | 6.67E-23 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1 | 111 | 8.1E-29 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 195 | 345 | 8.2E-23 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 346 | 505 | 2.5E-34 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 112 | 188 | 4.4E-7 | - |
| SMART | SM00225 | BTB_4 | 379 | 475 | 1.3E-13 | IPR000210 |
| SMART | SM00225 | BTB_4 | 1 | 111 | 1.9E-13 | IPR000210 |
| SMART | SM00061 | math_3 | 214 | 321 | 1.3E-4 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 379 | 443 | 11.791785 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 1 | 58 | 15.990232 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 209 | 338 | 19.44487 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_044344167.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | M8BMS9 | Speckle-type POZ protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG012330.