Basic Information
Locus ID:
gene:TRIDC3BG004140
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 14715868 | 14717160 | + | gene:TRIDC3BG004140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 42,112.83 Da | 57.50 | 81.82 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 194 | 309 | 3.80544E-48 | - |
| CDD | cd00121 | MATH | 36 | 166 | 1.31839E-30 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 197 | 311 | 3.0E-26 | IPR000210 |
| Pfam | PF00917 | MATH domain | 55 | 167 | 1.8E-4 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 182 | 312 | 6.67E-30 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 33 | 169 | 2.13E-31 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 35 | 169 | 1.1E-29 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 180 | 306 | 1.8E-34 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 311 | 379 | 4.8E-21 | - |
| SMART | SM00225 | BTB_4 | 205 | 312 | 1.3E-24 | IPR000210 |
| SMART | SM00061 | math_3 | 40 | 148 | 3.5E-4 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 205 | 274 | 17.768883 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 35 | 165 | 21.081318 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037416382.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A077RRS6 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF032500020CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG004140.