HalophFGD

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Basic Information
Locus ID: gene:TRIDC3BG004090
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
Chromosome Start End Strand ID
3B 14391282 14392330 + gene:TRIDC3BG004090
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.60 30,844.96 Da 32.43 83.96 -0.09
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18280 BTB_POZ_BPM_plant 91 201 7.63121E-52 -
CDD cd00121 MATH 1 62 8.65343E-4 IPR002083
Pfam PF00651 BTB/POZ domain 93 202 1.2E-25 IPR000210
SUPERFAMILY SSF54695 POZ domain 83 202 1.14E-32 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 78 199 1.4E-37 IPR011333
Gene3D G3DSA:1.25.40.420 - 203 276 5.5E-16 -
SMART SM00225 BTB_4 102 204 1.3E-23 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 102 169 17.189787 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G06190.1 BTB-POZ and MATH domain 2. 0
RefSeq XP_037417242.1 BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] 0
Swiss-Prot Q9M8J9 BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 0
TrEMBL A0A077RP94 Speckle-type POZ protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF102200060CFD_c1 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC3BG004090.

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