Basic Information
Locus ID:
gene:TRIDC3BG002490
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 7892933 | 7896659 | - | gene:TRIDC3BG002490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 120,979.76 Da | 36.66 | 103.65 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 488 | 540 | 8.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 47 | 86 | 2.2E-10 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 382 | 404 | 1.2 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 626 | 684 | 6.5E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 556 | 610 | 4.6E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 456 | 478 | 0.64 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 819 | 1086 | 4.6E-41 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 75 | 444 | 3.74E-60 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 362 | 715 | 4.87E-69 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 790 | 1088 | 3.24E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 789 | 890 | 1.4E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 237 | 447 | 7.3E-58 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 448 | 743 | 6.4E-89 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 213 | 3.4E-46 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 891 | 1107 | 2.3E-54 | - |
| SMART | SM00365 | LRR_sd22_2 | 332 | 358 | 610.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 380 | 406 | 25.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 671 | 694 | 140.0 | - |
| SMART | SM00220 | serkin_6 | 815 | 1094 | 5.2E-31 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 575 | 596 | 68.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 137 | 163 | 71.0 | - |
| SMART | SM00369 | LRR_typ_2 | 161 | 184 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 575 | 598 | 5.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 454 | 478 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 503 | 526 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 599 | 623 | 93.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 380 | 404 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 671 | 695 | 5.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 551 | 574 | 260.0 | - |
| SMART | SM00369 | LRR_typ_2 | 527 | 551 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 113 | 137 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 332 | 356 | 130.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 503 | 532 | 620.0 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 577 | 598 | 7.157505 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 815 | 1091 | 34.70393 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 936 | 948 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 821 | 843 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 383 | 396 | 2.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 671 | 684 | 2.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47570.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037410900.1 | receptor kinase-like protein Xa21 [Triticum dicoccoides] | 0 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6FEY1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG002490.