HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC3BG002450
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: receptor-like protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
3B 7782294 7784947 - gene:TRIDC3BG002450
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.04 50,967.79 Da 42.52 94.15 0.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13947 Wall-associated receptor kinase galacturonan-binding 23 86 8.1E-14 IPR025287
Pfam PF07714 Protein tyrosine and serine/threonine kinase 361 445 2.6E-16 IPR001245
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 344 446 2.56E-23 IPR011009
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 332 435 4.6E-24 -
ProSiteProfiles PS50011 Protein kinase domain profile. 359 448 13.531199 IPR000719
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 365 388 - IPR017441
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding) GO:0030247 (polysaccharide binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G29050.1 Concanavalin A-like lectin protein kinase family protein. 0
RefSeq XP_044346789.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5 isoform X1 [Triticum aestivum] 0
Swiss-Prot P93604 Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1 0
TrEMBL A0A3B6FHR0 non-specific serine/threonine protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC3BG002450.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.