Basic Information
Locus ID:
gene:TRIDC3BG002250
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 7667081 | 7671007 | + | gene:TRIDC3BG002250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 65,488.71 Da | 35.64 | 85.44 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 292 | 562 | 6.886E-87 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 11 | 64 | 2.0E-7 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 289 | 558 | 1.1E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 269 | 560 | 9.02E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 259 | 360 | 1.2E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 361 | 576 | 5.5E-52 | - |
| SMART | SM00220 | serkin_6 | 286 | 560 | 5.8E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 286 | 575 | 38.548378 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 409 | 421 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 292 | 314 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38280.1 | PR5-like receptor kinase. putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase | 0 |
| RefSeq | XP_037410887.1 | rust resistance kinase Lr10-like [Triticum dicoccoides] | 0 |
| P93604 | Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6WY25 | non-specific serine/threonine protein kinase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG002250.