Basic Information
Locus ID:
gene:TRIDC3BG000130
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3B | 1039731 | 1043491 | + | gene:TRIDC3BG000130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.74 | 10,894.38 Da | 49.22 | 70.32 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16485 | mRING-H2-C3H2C2D_RBX1 | 25 | 86 | 7.17395E-42 | - |
| Pfam | PF12678 | RING-H2 zinc finger domain | 25 | 83 | 1.0E-25 | IPR024766 |
| SUPERFAMILY | SSF57850 | RING/U-box | 5 | 90 | 3.89E-40 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 93 | 7.3E-35 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 38 | 83 | 9.30263 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko03420 (Nucleotide excision repair)
map03420 (Nucleotide excision repair)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04120 (Ubiquitin mediated proteolysis)
map04120 (Ubiquitin mediated proteolysis)
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04341 (Hedgehog signaling pathway - fly)
map04341 (Hedgehog signaling pathway - fly)
ko04350 (TGF-beta signaling pathway)
map04350 (TGF-beta signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20570.1 | RING-box 1. Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein. | 0 |
| RefSeq | XP_037403696.1 | RING-box protein 1 [Triticum dicoccoides] | 0 |
| Q940X7 | RING-box protein 1a OS=Arabidopsis thaliana OX=3702 GN=RBX1A PE=1 SV=1 | 0 | |
| TrEMBL | A0A453DMS0 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3BG000130.