Basic Information
Locus ID:
gene:TRIDC3AG074680
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 745502809 | 745506255 | - | gene:TRIDC3AG074680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 51,556.23 Da | 48.13 | 71.92 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 195 | 454 | 1.98848E-41 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 329 | 369 | 0.0018 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 418 | 454 | 1.1E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 289 | 324 | 1.9E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 158 | 455 | 5.49E-59 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 119 | 456 | 1.3E-120 | IPR015943 |
| SMART | SM00320 | WD40_4 | 372 | 412 | 270.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 157 | 198 | 160.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 201 | 241 | 0.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 327 | 369 | 3.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 244 | 281 | 4.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 285 | 324 | 1.8E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 415 | 454 | 1.3E-7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 209 | 250 | 9.071468 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 292 | 333 | 13.917108 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 422 | 455 | 11.523771 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 292 | 324 | 10.943775 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 422 | 455 | 13.917108 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 441 | 455 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 160 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 58 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13840.1 | FIZZY-related 3. | 0 |
| RefSeq | XP_037408700.1 | protein FIZZY-RELATED 3-like [Triticum dicoccoides] | 0 |
| A0A396ISC0 | B-type cell cycle switch protein ccs52B OS=Medicago truncatula OX=3880 GN=CCS52B PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6ERZ2 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG074680.