Basic Information
Locus ID:
gene:TRIDC3AG071690
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 729087324 | 729087998 | - | gene:TRIDC3AG071690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 25,794.62 Da | 36.30 | 98.75 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 3 | 62 | 2.9E-12 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 151 | 221 | 4.2E-24 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 72 | 140 | 4.8E-18 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 66 | 142 | 4.73E-19 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 63 | 1.42E-15 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 144 | 223 | 4.44E-25 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 146 | 224 | 7.8E-31 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 65 | 6.8E-17 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 66 | 145 | 3.8E-25 | - |
| SMART | SM00213 | ubq_7 | 1 | 65 | 2.0E-10 | IPR000626 |
| SMART | SM00213 | ubq_7 | 66 | 139 | 3.4E-14 | IPR000626 |
| SMART | SM00213 | ubq_7 | 149 | 220 | 1.3E-22 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 149 | 224 | 22.591187 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 62 | 12.051893 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 66 | 139 | 16.733604 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 159 | 179 | 2.3E-22 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 180 | 200 | 2.3E-22 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 201 | 222 | 2.3E-22 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_037410586.1 | polyubiquitin-like [Triticum dicoccoides] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7Q0T4 | Polyubiquitin OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG071690.