Basic Information
Locus ID:
gene:TRIDC3AG071650
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 728962882 | 728974846 | - | gene:TRIDC3AG071650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 27,546.51 Da | 35.90 | 98.60 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 157 | 226 | 4.0E-18 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 10 | 69 | 1.6E-8 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 80 | 145 | 2.0E-16 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 148 | 226 | 4.77E-22 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 72 | 1.34E-14 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 71 | 145 | 8.56E-16 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 5 | 71 | 1.3E-14 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 151 | 232 | 1.5E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 72 | 150 | 1.6E-21 | - |
| SMART | SM00213 | ubq_7 | 155 | 227 | 6.7E-18 | IPR000626 |
| SMART | SM00213 | ubq_7 | 8 | 72 | 3.0E-6 | IPR000626 |
| SMART | SM00213 | ubq_7 | 75 | 146 | 1.5E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 73 | 145 | 15.579509 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 155 | 226 | 17.212662 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 165 | 185 | 2.7E-11 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 208 | 229 | 2.7E-11 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_044337984.1 | polyubiquitin-like [Triticum aestivum] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6H3Z9 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG071650.