Basic Information
Locus ID:
gene:TRIDC3AG071630
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 728761756 | 728762427 | + | gene:TRIDC3AG071630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.05 | 25,479.26 Da | 40.40 | 113.14 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 3 | 61 | 6.4E-11 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 67 | 135 | 2.0E-18 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 150 | 220 | 9.5E-24 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 2 | 64 | 5.18E-14 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 142 | 222 | 6.84E-26 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 62 | 137 | 2.53E-18 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 144 | 223 | 6.4E-30 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 61 | 1.5E-13 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 62 | 143 | 1.2E-25 | - |
| SMART | SM00213 | ubq_7 | 1 | 64 | 1.3E-5 | IPR000626 |
| SMART | SM00213 | ubq_7 | 65 | 138 | 3.0E-16 | IPR000626 |
| SMART | SM00213 | ubq_7 | 148 | 219 | 1.3E-23 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 65 | 137 | 16.820705 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 148 | 223 | 22.504086 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 31 | 61 | 11.507508 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 174 | 199 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 179 | 199 | 2.4E-22 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 200 | 221 | 2.4E-22 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 158 | 178 | 2.4E-22 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_037410584.1 | polyubiquitin-like [Triticum dicoccoides] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6ERC2 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG071630.