Basic Information
Locus ID:
gene:TRIDC3AG071620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 728710226 | 728712056 | + | gene:TRIDC3AG071620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 27,974.72 Da | 46.39 | 82.81 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 173 | 239 | 2.0E-15 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 97 | 160 | 1.6E-16 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 24 | 83 | 8.1E-14 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 14 | 84 | 6.1E-18 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 85 | 164 | 3.6E-18 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 169 | 240 | 1.79E-15 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 164 | 246 | 4.7E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 13 | 86 | 2.1E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 87 | 160 | 3.7E-23 | - |
| SMART | SM00213 | ubq_7 | 171 | 242 | 1.3E-10 | IPR000626 |
| SMART | SM00213 | ubq_7 | 87 | 160 | 2.2E-15 | IPR000626 |
| SMART | SM00213 | ubq_7 | 22 | 86 | 2.8E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 171 | 240 | 14.795594 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 22 | 83 | 13.053562 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 87 | 164 | 18.040127 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 119 | 139 | 3.8E-11 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 98 | 118 | 3.8E-11 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02890.1 | Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats. | 0 |
| RefSeq | XP_020177601.1 | polyubiquitin 11-like [Aegilops tauschii subsp. strangulata] | 0 |
| P0CH33 | Polyubiquitin 11 OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6EQI3 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG071620.