Basic Information
Locus ID:
gene:TRIDC3AG070300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 722055963 | 722058263 | + | gene:TRIDC3AG070300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 26,046.01 Da | 66.49 | 74.08 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 12 | 39 | 1.2E-5 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 8 | 46 | 3.53E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 54 | 1.2E-6 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 15 | 40 | 8.963311 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 15 | 24 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 233 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19430.2 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037410309.1 | uncharacterized protein LOC119273138 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A8I6XUV9 | RING-type domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG070300.