Basic Information
Locus ID:
gene:TRIDC3AG068550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Speckle-type POZ protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 712030886 | 712032427 | + | gene:TRIDC3AG068550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 39,343.39 Da | 44.21 | 85.21 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 22 | 147 | 2.19279E-33 | IPR002083 |
| Pfam | PF00917 | MATH domain | 39 | 147 | 1.8E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 179 | 289 | 7.9E-26 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 19 | 157 | 6.21E-41 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 164 | 291 | 1.1E-32 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 290 | 354 | 8.0E-16 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 164 | 286 | 8.4E-38 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 22 | 152 | 7.8E-36 | IPR008974 |
| SMART | SM00225 | BTB_4 | 188 | 291 | 5.9E-24 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 21 | 147 | 23.433712 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 188 | 256 | 17.375925 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037408348.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6ERM8 | Speckle-type POZ protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG068550.