Basic Information
Locus ID:
gene:TRIDC3AG068340
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 711755342 | 711756949 | + | gene:TRIDC3AG068340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.62 | 45,798.32 Da | 47.01 | 75.80 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 199 | 228 | 0.0044 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 376 | 411 | 0.035 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 85 | 417 | 5.04E-42 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 60 | 170 | 9.9E-9 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 172 | 273 | 3.7E-15 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 276 | 433 | 5.6E-17 | IPR015943 |
| SMART | SM00320 | WD40_4 | 326 | 363 | 0.16 | IPR001680 |
| SMART | SM00320 | WD40_4 | 369 | 412 | 1.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 112 | 150 | 6.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 191 | 229 | 0.007 | IPR001680 |
| SMART | SM00320 | WD40_4 | 277 | 321 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 232 | 269 | 0.032 | IPR001680 |
| SMART | SM00320 | WD40_4 | 68 | 109 | 130.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 197 | 238 | 10.775796 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51930.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037410495.1 | protein JINGUBANG-like [Triticum dicoccoides] | 0 |
| O48716 | Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6ERL4 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG068340.