Basic Information
Locus ID:
gene:TRIDC3AG065730
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 697238330 | 697239282 | + | gene:TRIDC3AG065730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 23,449.76 Da | 81.76 | 62.50 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 122 | 165 | 2.3E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 115 | 170 | 2.12E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 113 | 180 | 1.5E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 123 | 164 | 4.1E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 123 | 165 | 12.179465 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 208 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| Coils | Coil | Coil | 183 | 203 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15100.1 | RING-H2 finger A2A. Encodes a putative RING-H2 finger protein RHA2a. | 0 |
| RefSeq | XP_037408208.1 | E3 ubiquitin-protein ligase RNF181 homolog isoform X1 [Triticum dicoccoides] | 0 |
| Q9ZT50 | E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 SV=1 | 0 | |
| TrEMBL | A0A453GIR7 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG065730.