Basic Information
Locus ID:
gene:TRIDC3AG064960
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 692576317 | 692577369 | - | gene:TRIDC3AG064960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 37,713.14 Da | 69.96 | 79.26 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 121 | 164 | 1.60641E-16 | - |
| Pfam | PF13639 | Ring finger domain | 121 | 164 | 2.5E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 117 | 170 | 1.02E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 78 | 169 | 1.2E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 122 | 163 | 4.6E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 122 | 164 | 11.264779 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 198 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 350 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G35330.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037410175.1 | RING-H2 finger protein ATL32-like [Triticum dicoccoides] | 0 |
| Q8H7N9 | E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0188200 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6EP72 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG064960.