Basic Information
Locus ID:
gene:TRIDC3AG062180
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBC27
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 678299963 | 678304818 | - | gene:TRIDC3AG062180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.85 | 21,393.02 Da | 47.39 | 81.63 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14312 | UBA_II_E2_UBC27_like | 159 | 194 | 1.24143E-17 | IPR041974 |
| CDD | cd00195 | UBCc | 4 | 147 | 1.30707E-50 | IPR000608 |
| Pfam | PF00627 | UBA/TS-N domain | 159 | 192 | 2.1E-9 | IPR015940 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 6 | 146 | 1.5E-42 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 6 | 152 | 2.61E-49 | IPR016135 |
| SUPERFAMILY | SSF46934 | UBA-like | 152 | 196 | 2.53E-10 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 157 | 196 | 5.2E-9 | - |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 2 | 154 | 9.9E-55 | IPR016135 |
| SMART | SM00165 | uba_6 | 158 | 195 | 2.4E-7 | IPR015940 |
| SMART | SM00212 | ubc_7 | 5 | 152 | 3.7E-61 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 2 | 152 | 47.711624 | IPR000608 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 157 | 196 | 12.90835 | IPR015940 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 78 | 94 | - | IPR023313 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50870.1 | ubiquitin-conjugating enzyme 27. | 0 |
| RefSeq | XP_037408038.1 | ubiquitin-conjugating enzyme E2 27-like [Triticum dicoccoides] | 0 |
| Q9FI61 | Ubiquitin-conjugating enzyme E2 27 OS=Arabidopsis thaliana OX=3702 GN=UBC27 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6EQ39 | E2 ubiquitin-conjugating enzyme OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG062180.