Basic Information
Locus ID:
gene:TRIDC3AG061660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 675561830 | 675565660 | - | gene:TRIDC3AG061660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.33 | 52,623.21 Da | 39.14 | 75.19 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 439 | 476 | 7.3E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 392 | 431 | 6.7E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 261 | 297 | 0.0033 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 198 | 476 | 4.21E-50 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 344 | 481 | 4.0E-30 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 80 | 343 | 1.5E-24 | IPR015943 |
| SMART | SM00320 | WD40_4 | 300 | 338 | 3.0E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 342 | 381 | 9.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 255 | 297 | 8.3E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 436 | 476 | 1.3E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 391 | 431 | 1.6E-9 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 264 | 298 | 9.836508 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 398 | 440 | 15.821944 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 398 | 436 | 12.841948 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 264 | 306 | 12.680634 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 284 | 298 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 418 | 432 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 463 | 477 | 1.4E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 284 | 298 | 1.4E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 418 | 432 | 1.4E-7 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 136 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18905.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037410082.1 | uncharacterized WD repeat-containing protein C17D11.16-like [Triticum dicoccoides] | 0 |
| Q9P775 | Uncharacterized WD repeat-containing protein C17D11.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1711.16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EP09 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG061660.