Basic Information
Locus ID:
gene:TRIDC3AG060900
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 668716330 | 668718325 | - | gene:TRIDC3AG060900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 39,945.04 Da | 51.39 | 76.45 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 326 | 366 | 2.9E-6 | IPR002893 |
| SUPERFAMILY | SSF81901 | HCP-like | 117 | 230 | 3.14E-12 | - |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 325 | 371 | 5.58E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 41 | 96 | 1.7E-7 | IPR036047 |
| Gene3D | G3DSA:6.10.140.2220 | - | 314 | 370 | 5.4E-10 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 105 | 306 | 2.3E-18 | IPR011990 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 324 | 366 | 11.127352 | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_037407979.1 | F-box protein At1g67340-like [Triticum dicoccoides] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7PYG1 | MYND-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG060900.