Basic Information
Locus ID:
gene:TRIDC3AG060350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 664713461 | 664765135 | + | gene:TRIDC3AG060350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.99 | 30,180.53 Da | 51.22 | 72.84 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 209 | 246 | 5.6E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 200 | 253 | 8.62E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 199 | 261 | 3.9E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 209 | 246 | 3.8E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 209 | 247 | 12.223724 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 224 | 233 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07200.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_044337617.1 | probable histone acetyltransferase HAC-like 1 isoform X1 [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6EQN9 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG060350.