Basic Information
Locus ID:
gene:TRIDC3AG060130
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 662022718 | 662025138 | - | gene:TRIDC3AG060130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 15,269.90 Da | 49.03 | 63.71 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16116 | Ubl_Smt3_like | 61 | 133 | 3.36064E-49 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 62 | 132 | 1.2E-24 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 42 | 137 | 1.84E-27 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 60 | 138 | 2.6E-38 | - |
| SMART | SM00213 | ubq_7 | 62 | 133 | 2.5E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 60 | 137 | 15.514182 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 60 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26840.1 | small ubiquitin-like modifier 1. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. | 0 |
| RefSeq | XP_037407939.1 | small ubiquitin-related modifier 1-like [Triticum dicoccoides] | 0 |
| P55857 | Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453GB66 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG060130.