Basic Information
Locus ID:
gene:TRIDC3AG060040
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 661738307 | 661744858 | + | gene:TRIDC3AG060040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 142,915.61 Da | 38.17 | 108.64 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1024 | 1292 | 5.31416E-99 | - |
| Pfam | PF13855 | Leucine rich repeat | 202 | 261 | 1.9E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 582 | 642 | 6.8E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1021 | 1288 | 4.9E-41 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 671 | 726 | 6.0E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 41 | 79 | 1.0E-9 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 670 | 899 | 1.53E-40 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 314 | 2.58E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 999 | 1291 | 2.6E-77 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 355 | 654 | 3.84E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 437 | 510 | 3.3E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 511 | 656 | 1.1E-44 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 660 | 906 | 3.7E-56 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 97 | 336 | 5.1E-73 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1095 | 1300 | 6.9E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 96 | 1.3E-6 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 980 | 1094 | 1.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 337 | 436 | 2.2E-22 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 581 | 605 | 5.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 1018 | 1297 | 2.4E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 737 | 761 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 224 | 244 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 629 | 653 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 320 | 344 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 200 | 223 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 762 | 786 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 128 | 152 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 272 | 296 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 838 | 861 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 464 | 485 | 240.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1018 | 1303 | 36.809895 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1141 | 1153 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1024 | 1046 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 713 | 726 | 7.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 227 | 240 | 7.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07280.1 | Leucine-rich repeat transmembrane protein kinase. Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther. | 0 |
| RefSeq | XP_037407934.1 | leucine-rich repeat receptor protein kinase MSP1-like [Triticum dicoccoides] | 0 |
| Q8RZV7 | Leucine-rich repeat receptor protein kinase MSP1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EQK9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG060040.