Basic Information
Locus ID:
gene:TRIDC3AG056560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 640504886 | 640509788 | + | gene:TRIDC3AG056560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 73,835.95 Da | 54.43 | 90.52 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 55 | 93 | 8.0E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 390 | 658 | 2.7E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 391 | 663 | 3.83E-47 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 239 | 3.89E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 366 | 461 | 1.2E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 212 | 260 | 5.9E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 211 | 1.3E-35 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 462 | 686 | 7.0E-39 | - |
| SMART | SM00369 | LRR_typ_2 | 145 | 168 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 144 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 216 | 247 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 192 | 110.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 387 | 665 | 26.916096 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 699 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 670 | 699 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037407683.1 | probable inactive receptor kinase At2g26730 [Triticum dicoccoides] | 0 |
| O48788 | Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana OX=3702 GN=At2g26730 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EM66 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG056560.