halophFGD

Basic Information

Locus ID: gene:TRIDC3AG055620

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
3A	634702998	634703825	-	gene:TRIDC3AG055620

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.79	21,236.05 Da	46.98	86.21	-0.42

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00240	Ubiquitin family	91	160	4.6E-8	IPR000626
SUPERFAMILY	SSF54236	Ubiquitin-like	72	161	5.76E-14	IPR029071
Gene3D	G3DSA:3.10.20.90	-	90	162	1.7E-17	-
ProSiteProfiles	PS50053	Ubiquitin domain profile.	91	161	11.485733	IPR000626

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G14360.1	Ubiquitin-like superfamily protein.
RefSeq	XP_037409809.1	BAG family molecular chaperone regulator 4-like [Triticum dicoccoides]
Swiss-Prot	Q8RX71	BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana OX=3702 GN=BAG4 PE=1 SV=1
TrEMBL	A0A3B6ERD3	Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC3AG055620.