Basic Information
Locus ID:
gene:TRIDC3AG050600
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK13
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 596200354 | 596206403 | + | gene:TRIDC3AG050600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 60,961.91 Da | 42.80 | 84.17 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 72 | 330 | 1.52929E-135 | - |
| CDD | cd00051 | EFh | 450 | 512 | 1.35165E-20 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 377 | 437 | 1.4E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 75 | 331 | 1.2E-73 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 449 | 512 | 6.8E-15 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 359 | 536 | 5.77E-47 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 71 | 338 | 4.05E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 74 | 158 | 3.3E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 159 | 339 | 2.3E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 340 | 515 | 1.4E-55 | - |
| SMART | SM00054 | efh_1 | 414 | 442 | 0.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 486 | 514 | 5.9E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 73 | 331 | 3.4E-96 | IPR000719 |
| SMART | SM00054 | efh_1 | 450 | 478 | 2.2E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 378 | 406 | 2.0E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 374 | 409 | 15.88028 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 73 | 331 | 46.590622 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 482 | 517 | 14.597092 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 410 | 445 | 8.766953 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 446 | 481 | 15.182896 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 495 | 507 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 459 | 471 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 193 | 205 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 79 | 102 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 387 | 399 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037407210.1 | calcium-dependent protein kinase 3 [Triticum dicoccoides] | 0 |
| Q8LPZ7 | Calcium-dependent protein kinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6ELS1 | Calcium-dependent protein kinase 30 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG050600.