Basic Information
Locus ID:
gene:TRIDC3AG050480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 595271494 | 595272283 | - | gene:TRIDC3AG050480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 19,865.22 Da | 47.53 | 74.53 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 128 | 171 | 2.32487E-18 | - |
| Pfam | PF13639 | Ring finger domain | 128 | 171 | 7.4E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 122 | 179 | 5.05E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 92 | 176 | 1.1E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 129 | 170 | 1.7E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 129 | 171 | 12.356501 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G11110.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037409678.1 | RING-H2 finger protein ATL66-like [Triticum dicoccoides] | 0 |
| Q9SRM0 | RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6ELR1 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG050480.